Include cleanups.

mlpp/activation/activation.cpp

@@ -5,8 +5,8 @@
 //
 
 #include <iostream>
-#include "LinAlg/LinAlg.hpp"
-#include "Activation.hpp"
+#include "../lin_alg/lin_alg.h"
+#include "activation.h"
 #include <cmath>
 #include <algorithm>
 

mlpp/ann/ann.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "ANN.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "ann.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <cmath>

mlpp/ann/ann.h

@@ -7,8 +7,8 @@
 #ifndef ANN_hpp
 #define ANN_hpp
 
-#include "HiddenLayer/HiddenLayer.hpp"
-#include "OutputLayer/OutputLayer.hpp"
+#include "hidden_layer/hidden_layer.h"
+#include "output_layer/output_layer.h"
 
 #include <vector>
 #include <tuple>

mlpp/auto_encoder/auto_encoder.cpp

@@ -4,11 +4,11 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "AutoEncoder.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "auto_encoder.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/bernoulli_nb/bernoulli_nb.cpp

@@ -4,10 +4,10 @@
 //  Created by Marc Melikyan on 1/17/21.
 //
 
-#include "BernoulliNB.hpp"
-#include "Utilities/Utilities.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Data/Data.hpp"
+#include "bernoulli_nb.h"
+#include "../utilities/utilities.h"
+#include "../lin_alg/lin_alg.h"
+#include "../data/data.h"
 
 #include <iostream>
 #include <random>

mlpp/c_log_log_reg/c_log_log_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "CLogLogReg.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "c_log_log_reg.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/convolutions/convolutions.cpp

@@ -5,9 +5,9 @@
 //
 
 #include <iostream>
-#include "Convolutions/Convolutions.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Stat/Stat.hpp"
+#include "../convolutions/convolutions.h"
+#include "../lin_alg/lin_alg.h"
+#include "../stat/stat.h"
 #include <cmath>
 
 namespace MLPP{

mlpp/cost/cost.cpp

@@ -6,9 +6,9 @@
 
 #include <iostream>
 #include <cmath>
-#include "Cost.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
+#include "cost.hpp"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
 
 namespace MLPP{
     double Cost::MSE(std::vector <double> y_hat, std::vector<double> y){

mlpp/data/data.cpp

@@ -5,10 +5,10 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "Data.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Stat/Stat.hpp"
-#include "SoftmaxNet/SoftmaxNet.hpp"
+#include "data.hpp"
+#include "../lin_alg/lin_alg.h"
+#include "../stat/stat.h"
+#include "../softmax_net/softmax_net.h"
 #include <iostream>
 #include <random>
 #include <cmath>

mlpp/dual_svc/dual_svc.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "DualSVC.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "dual_svc.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/exp_reg/exp_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "ExpReg.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Stat/Stat.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "exp_reg.h"
+#include "../lin_alg/lin_alg.h"
+#include "../stat/stat.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/gan/gan.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "GAN.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "gan.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <cmath>

mlpp/gan/gan.h

@@ -7,8 +7,8 @@
 #ifndef GAN_hpp
 #define GAN_hpp
 
-#include "HiddenLayer/HiddenLayer.hpp"
-#include "OutputLayer/OutputLayer.hpp"
+#include "../hidden_layer/hidden_layer.h"
+#include "../output_layer/output_layer.h"
 
 #include <vector>
 #include <tuple>

mlpp/gauss_markov_checker/gauss_markov_checker.cpp

@@ -4,8 +4,8 @@
 //  Created by Marc Melikyan on 11/13/20.
 //
 
-#include "GaussMarkovChecker.hpp"
-#include "Stat/Stat.hpp"
+#include "gauss_markov_checker.h"
+#include "../stat/stat.h"
 #include <iostream>
 
 

mlpp/gaussian_nb/gaussian_nb.cpp

@@ -4,10 +4,10 @@
 //  Created by Marc Melikyan on 1/17/21.
 //
 
-#include "GaussianNB.hpp"
-#include "Stat/Stat.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Utilities/Utilities.hpp"
+#include "gaussian_nb.h"
+#include "../stat/stat.h"
+#include "../lin_alg/lin_alg.h"
+#include "../utilities/utilities.h"
 
 #include <iostream>
 #include <algorithm>

mlpp/hidden_layer/hidden_layer.cpp

@@ -4,10 +4,10 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "HiddenLayer.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Utilities/Utilities.hpp"
+#include "hidden_layer.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../utilities/utilities.h"
 
 #include <iostream>
 #include <random>

mlpp/hidden_layer/hidden_layer.h

@@ -7,7 +7,7 @@
 #ifndef HiddenLayer_hpp
 #define HiddenLayer_hpp
 
-#include "Activation/Activation.hpp"
+#include "../activation/activation.h"
 
 #include <vector>
 #include <map>

mlpp/hypothesis_testing/hypothesis_testing.cpp

@@ -4,7 +4,7 @@
 //  Created by Marc Melikyan on 3/10/21.
 //
 
-#include "HypothesisTesting.hpp"
+#include "hypothesis_testing.h"
 
 namespace MLPP{
 

mlpp/kmeans/kmeans.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "KMeans.hpp"
-#include "Utilities/Utilities.hpp"
-#include "LinAlg/LinAlg.hpp"
+#include "kmeans.h"
+#include "../utilities/utilities.h"
+#include "../lin_alg/lin_alg.h"
 
 #include <iostream>
 #include <random>

mlpp/knn/knn.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "kNN.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Utilities/Utilities.hpp"
+#include "knn.h"
+#include "../lin_alg/lin_alg.h"
+#include "../utilities/utilities.h"
 
 #include <iostream>
 #include <map>

mlpp/lin_alg/lin_alg.cpp

@@ -4,8 +4,8 @@
 //  Created by Marc Melikyan on 1/8/21.
 //
 
-#include "LinAlg.hpp"
-#include "Stat/Stat.hpp"
+#include "lin_alg.hpp"
+#include "../stat/stat.h"
 #include <iostream>
 #include <random>
 #include <map>

mlpp/lin_reg/lin_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "LinReg.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Stat/Stat.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "lin_reg.h"
+#include "../lin_alg/lin_alg.h"
+#include "../stat/stat.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <cmath>

mlpp/log_reg/log_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "LogReg.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "log_reg.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/mann/mann.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "MANN.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "mann.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 

mlpp/mann/mann.h

@@ -7,8 +7,8 @@
 #ifndef MANN_hpp
 #define MANN_hpp
 
-#include "HiddenLayer/HiddenLayer.hpp"
-#include "MultiOutputLayer/MultiOutputLayer.hpp"
+#include "../hidden_layer/hidden_layer.h"
+#include "../multi_output_layer/multi_output_layer.h"
 
 #include <vector>
 #include <string>

mlpp/mlp/mlp.cpp

@@ -4,12 +4,13 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "MLP.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "mlp.h"
+
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/multi_output_layer/multi_output_layer.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "MultiOutputLayer.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Utilities/Utilities.hpp"
+#include "multi_output_layer.h"
+#include "../lin_alg/lin_alg.h"
+#include "../utilities/utilities.h"
 
 #include <iostream>
 #include <random>

mlpp/multi_output_layer/multi_output_layer.h

@@ -7,8 +7,8 @@
 #ifndef MultiOutputLayer_hpp
 #define MultiOutputLayer_hpp
 
-#include "Activation/Activation.hpp"
-#include "Cost/Cost.hpp"
+#include "../activation/activation.h"
+#include "../cost/cost.h"
 
 #include <vector>
 #include <map>

mlpp/multinomial_nb/multinomial_nb.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 1/17/21.
 //
 
-#include "MultinomialNB.hpp"
-#include "Utilities/Utilities.hpp"
-#include "LinAlg/LinAlg.hpp"
+#include "multinomial_nb.h"
+#include "../utilities/utilities.h"
+#include "../lin_alg/lin_alg.h"
 
 #include <iostream>
 #include <algorithm>

mlpp/numerical_analysis/numerical_analysis.cpp

@@ -4,8 +4,9 @@
 //  Created by Marc Melikyan on 11/13/20.
 //
 
-#include "NumericalAnalysis.hpp"
-#include "LinAlg/LinAlg.hpp"
+#include "numerical_analysis.h"
+#include "../lin_alg/lin_alg.h"
+
 #include <iostream>
 #include <string>
 #include <cmath>

mlpp/outlier_finder/outlier_finder.cpp

@@ -4,8 +4,8 @@
 //  Created by Marc Melikyan on 11/13/20.
 //
 
-#include "OutlierFinder.hpp"
-#include "Stat/Stat.hpp"
+#include "outlier_finder.h"
+#include "../stat/stat.h"
 #include <iostream>
 
 namespace MLPP{

mlpp/output_layer/output_layer.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "OutputLayer.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Utilities/Utilities.hpp"
+#include "output_layer.h"
+#include "../lin_alg/lin_alg.h"
+#include "../utilities/utilities.h"
 
 #include <iostream>
 #include <random>

mlpp/output_layer/output_layer.h

@@ -7,8 +7,8 @@
 #ifndef OutputLayer_hpp
 #define OutputLayer_hpp
 
-#include "Activation/Activation.hpp"
-#include "Cost/Cost.hpp"
+#include "../activation/activation.h"
+#include "../cost/cost.h"
 
 #include <vector>
 #include <map>

mlpp/pca/pca.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "PCA.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Data/Data.hpp"
+#include "pca.h"
+#include "../lin_alg/lin_alg.h"
+#include "../data/data.h"
 
 #include <iostream>
 #include <random>

mlpp/probit_reg/probit_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "ProbitReg.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "probit_reg.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/regularization/reg.cpp

@@ -6,9 +6,9 @@
 
 #include <iostream>
 #include <random>
-#include "Reg.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Activation/Activation.hpp"
+#include "reg.h"
+#include "../lin_alg/lin_alg.h"
+#include "../activation/activation.h"
 
 namespace MLPP{
 

mlpp/softmax_net/softmax_net.cpp

@@ -4,13 +4,13 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "SoftmaxNet.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Data/Data.hpp"
-#include "Regularization/Reg.hpp"
-#include "Activation/Activation.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "softmax_net.h"
+#include "../lin_alg/lin_alg.h"
+#include "../data/data.h"
+#include "../regularization/reg.h"
+#include "../activation/activation.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/softmax_reg/softmax_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "SoftmaxReg.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Activation/Activation.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "softmax_reg.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../activation/activation.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/stat/stat.cpp

@@ -4,10 +4,10 @@
 //  Created by Marc Melikyan on 9/29/20.
 //
 
-#include "Stat.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Data/Data.hpp"
+#include "stat.hpp"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../data/data.h"
 #include <algorithm>
 #include <map>
 #include <cmath>

mlpp/svc/svc.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "SVC.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "svc.hpp"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/tanh_reg/tanh_reg.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 10/2/20.
 //
 
-#include "TanhReg.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "tanh_reg.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <random>

mlpp/transforms/transforms.cpp

@@ -4,8 +4,8 @@
 //  Created by Marc Melikyan on 11/13/20.
 //
 
-#include "Transforms.hpp"
-#include "LinAlg/LinAlg.hpp"
+#include "transforms.h"
+#include "../lin_alg/lin_alg.h"
 #include <iostream>
 #include <string>
 #include <cmath>

mlpp/uni_lin_reg/uni_lin_reg.cpp

@@ -4,9 +4,9 @@
 //  Created by Marc Melikyan on 9/29/20.
 //
 
-#include "UniLinReg.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Stat/Stat.hpp"
+#include "uni_lin_reg.h"
+#include "../lin_alg/lin_alg.h"
+#include "../stat/stat.h"
 #include <iostream>
 
 

mlpp/utilities/utilities.cpp

@@ -8,7 +8,7 @@
 #include <string>
 #include <random>
 #include <fstream>
-#include "Utilities.hpp"
+#include "utilities.h"
 
 namespace MLPP{
 

mlpp/wgan/wgan.cpp

@@ -4,12 +4,12 @@
 //  Created by Marc Melikyan on 11/4/20.
 //
 
-#include "WGAN.hpp"
-#include "Activation/Activation.hpp"
-#include "LinAlg/LinAlg.hpp"
-#include "Regularization/Reg.hpp"
-#include "Utilities/Utilities.hpp"
-#include "Cost/Cost.hpp"
+#include "wgan.h"
+#include "../activation/activation.h"
+#include "../lin_alg/lin_alg.h"
+#include "../regularization/reg.h"
+#include "../utilities/utilities.h"
+#include "../cost/cost.h"
 
 #include <iostream>
 #include <cmath>

mlpp/wgan/wgan.h

@@ -7,8 +7,8 @@
 #ifndef WGAN_hpp
 #define WGAN_hpp
 
-#include "HiddenLayer/HiddenLayer.hpp"
-#include "OutputLayer/OutputLayer.hpp"
+#include "../hidden_layer/hidden_layer.h"
+#include "../output_layer/output_layer.h"
 
 #include <vector>
 #include <tuple>